PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008237000.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 286aa    MW: 33045.9 Da    PI: 5.6758
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008237000.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.61.5e-1681412128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatg 87 
                     p GfrFhPtd+e+v  +L+  + +++    + +++i+ +++  +k+eP+++ +k+ +    ++++yf s  +k ++  kr  r + + g+W++t 
  XP_008237000.1   8 PLGFRFHPTDKEIVGSFLHTLLVDRNplmPPYSNFIRACNLfgNKLEPSEIWNKYGGpqlVDQDLYFLSGLKKLSP--KRMDRsIGHGGTWSETE 100
                     89******************988888787666678****9833589*****7544333335668899998888766..58888567799****** PP

             NAM  88 kdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + k +     + + +g k+ + + +  + + e+t W+++ey+l
  XP_008237000.1 101 SFKLIEYDngNPNPIGRKRKFRYEN--KGSEEHTWWLLDEYSL 141
                     ****9998444456********984..334469********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-193165IPR003441NAC domain
PROSITE profilePS5100522.6577166IPR003441NAC domain
PfamPF023651.8E-118141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MAHYQNVPLG FRFHPTDKEI VGSFLHTLLV DRNPLMPPYS NFIRACNLFG NKLEPSEIWN  60
KYGGPQLVDQ DLYFLSGLKK LSPKRMDRSI GHGGTWSETE SFKLIEYDNG NPNPIGRKRK  120
FRYENKGSEE HTWWLLDEYS LFVGPKNDYN DRSYDFDFVI CRMRKNDRAS SKEINLKRSS  180
QDQVQKKRST NKKMKKDHQM GSTEESSSHV QQGYSSSLTG GELVVSCDDV DQTDLTFFED  240
NPIFNIEQIL CETKVEDACS PSNSENADSS YSKWTESYME ELMACI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008237000.10.0PREDICTED: NAC domain-containing protein 2-like
TrEMBLM5VHT20.0M5VHT2_PRUPE; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1903626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.18e-09NAC family protein